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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831798.1_cds_XP_016504665.1_18082
CDS Infomation

[gene=LOC107822634] [db_xref=GeneID:107822634] [protein=cystathionine gamma-synthase 1, chloroplastic-like] [frame=2] [exception=annotated by transcript or proteomic data] [protein_id=XP_016504665.1] [location=complement(join(56382..56505,56799..56917,57015..57110,58049..58156,58358..58444,58535..58738,58829..58888,59184..59352,59470..59543,59827..59930,60043..>60269))] [gbkey=CDS]
Sequence

TCTAACAATAACTCATCTCCTGATTTCACTCCGGTGGCTAAGGCCGTCGATGCCGCCGCC
GCCGCCGCCGCCGCTATTGCTCCTGTTGATACCACGGTAGTTAACGAGGACGTGGCGTTG
GTGGAAAATGAGACTTGTAATGATCAAAATGTACAGTTTGACAGTTTGCCAAGTATGAAA
TACGCTTCGTTTTTGAATTCTGATGGGAGTGTCGCTATTCATGCCGGTGAAAGATTGGGA
CGTGGCATCGTTACGGATGCAATTACTACCCCAGTAGTTAACACATCTGCTTATTTCTTC
AACAAGACTTCTGAGCTCATTGATTTTAAGGAGAAAAGACGCGCAAGTTTTGAATATGGG
CGCTATGGGAACCCAACTACTGTTGTTTTAGAGGAGAAGATAAGCGCACTGGAGGGTGCT
GAATCAACCTTGTTAATGGCATCTGGAATGTGCGCCAGTACTGTAATGCTGTTGGCTTTG
GTTCCTGCTGGAGGCCATATTGTTACAACCACAGACTGCTATAGGAAGACCCGGATCTTT
ATTGAAACTATACTTCCTAAAATGGGGATTACGGCCACGGTCATTGACCCAGCCGATGTT
GGAGCTCTGGAGTTGGCTCTAAATCAGAAGAAAGTGAATCTTTTCTTTACCGAGTCTCCA
ACAAATCCATTCCTCAGATGTGTAGACATTGAGCTGGTTTCAAAGCTTTGTCATGAAAAA
GGAGCCTTGGTTTGCATAGATGGGACTTTTGCAACTCCTCTTAATCAAAAGGCCCTTGCC
CTTGGGGCTGACCTCGTTCTGCACTCTGCAACAAAATTCCTTGGTGGACATAATGATGTT
CTCGCAGGTTGCATTAGTGGTCCTTTAAAGTTAGTTTCAGAAATACGTAACCTGCATCAC
ATCCTGGGTGGTGCTCTCAATCCGAATGCCGCATATCTGATTATCCGAGGCATGAAGACG
TTGCATCTTCGTGTACAGCAACAAAACTCAACTGCATTGAGGATGGCCGAGATTTTAGAG
GCTCATCCCAAGGTGAGACATGTCTATTATCCAGGCCTGCAAAGTCATCCAGAACATCAC
ATTGCAAAGAAACAAATGACAGGTTTTGGTGGTGTGGTCAGTTTTGAGGTTGACGGAGAC
CTGCTTACAACCGCAAAATTTGTGGATGCTCTGAAAATTCCGTATATTGCTCCATCATTT
GGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTACTGGGATCTTAGCCAG
TCAGATAGAGCCAAGTATGGCATCATGGACAATTTGGTTAGGTTCAGCTTTGGTGTGGAA
GATTTTGATGACTTGAAAGCTGATATTCTTCAGGCTTTGGACTCAATATAG

Peptide Sequence

PEP ID

XP_016504665.1
PEP Infomation

PREDICTED: cystathionine gamma-synthase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVSSCARAFPSFECRSDAEFSGGIPRHDIPNSGKASILSHGSSVHGLSSLIYRFPPNFV
RQLSIKARRNCSNIGVAQVVAASWSNNNSSPDFTPVAKAVDAAAAAAAAIAPVDTTVVNE
DVALVENETCNDQNVQFDSLPSMKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTS
AYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLLMASGMCASTVM
LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFF
TESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGG
HNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMA
EILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGVVSFEVDGDLLTTAKFVDALKIPYI
APSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI

Transcript Sequence

Gene sequence data has not been registered.